salmon_partial_sa_index (version: 0.0.1)
Description: Transcriptome index for salmon, produced with salmon index using partial selective alignment method. Preparation includes transcriptome mapping to the genome and extraction of the relevant portion out from the genome and indexing it along with the transcriptome. Recipe source -- https://github.com/COMBINE-lab/SalmonTools/blob/master/scripts/generateDecoyTranscriptome.sh
Seek keys
| Name | Value | Type | Description |
|---|---|---|---|
| salmon_partial_sa_index |
.
|
directory | Directory with the partial Salmon index |
| dir |
.
|
directory | Path to the asset directory |