Attributes

• asset_path: star_index
• seek_keys:
• http | s3 star_index: .
• http | s3 dir: .
• archive_digest: 0559a80d882ceec9fa40774c1cf4ce5d
• archive_size: 255.4MB
• asset_size: 1.5GB
• asset_parents:
  • pseudomonas_aeruginosa_pao1-ncbi-2000-09-13/fasta:samtools-1.10
• asset_children: None
• asset_digest: 3d3318350d6b92ef9d9d5e818fa9fbdd
• legacy_archive_digest: d347d6dc08700a16fcacbd71529aa3ac

Refgenie CLI pull command

refgenie pull pseudomonas_aeruginosa_pao1-ncbi-2000-09-13/star_index:2.7.3a

API endpoints

• archive
• asset digest
• archive digest
• build recipe
• build log
• build inputs
• asset directory contents
• attributes

Asset directory contents

• http | s3: chrLength.txt
• http | s3: chrName.txt
• http | s3: chrNameLength.txt
• http | s3: chrStart.txt
• http | s3: Genome
• http | s3: genomeParameters.txt
• http | s3: SA
• http | s3: SAindex