Asset class: abundant_sequences
Description: Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences

Attributes

  • asset_path: abundant_sequences
  • asset_digest: c46f2ac8fdaf2d3315700ee6e2a5a47d
  • custom_properties:
    • version: None
  • date_built: 2021-08-27_14:27
  • seek_keys:
    • http | s3 abundant_sequences: .
    • http | s3 phix: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385_phix.fa
    • http | s3 polyA: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385_polyA.fa
    • http | s3 polyC: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385_polyC.fa
    • http | s3 adapter_contam: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385_adapter_contam.fa
    • http | s3 dir: .
  • asset_parents: None
  • asset_children: None
  • archive_digest: 6cce27be916202849960b3e3634c4eb9
  • archive_size: 2.3KB
  • asset_size: 17.0KB

Refgenie CLI pull command

refgenie pull staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/abundant_sequences:default

API endpoints

Asset directory contents

  • http | s3: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385_adapter_contam.fa
  • http | s3: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385_phix.fa
  • http | s3: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385_polyA.fa
  • http | s3: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385_polyC.fa