Aliases: equus_caballus-ucsc-equcab2
Digest: 09f77b43935f4202ae69ccaf171b36b43709c447cb7bd69c
Description: The Equus Caballus (equCab2) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 588.3KB / 2.3KB |
2ec4b318a757b63890efea2e98e1b957
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 10.7GB / 6.2GB |
a236204ada6168ffb2e1c81f901c7820
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.3GB / 2.2GB |
a444ef45374e9527a8c00324e8b20adc
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.1GB / 2.9GB |
993a011e827aeaae405d9224bb11678b
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 3.9GB / 2.6GB |
3f5d1d6aec25b8846aab8469cd8b01b7
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.2GB / 743.8MB |
d01583c34aff590ac92bb98cb708855b
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 1.3MB / 42.8KB |
de7830b83c4a85e2248dca49f5207453
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 21.6GB / 19.5GB |
ffded6afc63a3d619b21ca10b4886841
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