Aliases: bos_taurus-ncbi-btau_42

Digest: 0c19c1344fbc55afd9af707e323faba6fa71657daf850d3a

Description: The Bos Taurus (Btau_4.2) reference sequence from NCBI


Assets

download asset name:tag asset description asset/archive size archive digest
abundant_sequences:default Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences 587.7KB / 2.3KB 059e65cd387b926814f3a374fd477771
bismark_bt2_index:0.22.1 Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 11.5GB / 6.3GB 3597c71bcea8cd4049ea6be631387a52
bowtie1_index:1.3.0 Genome index for bowtie, produced with bowtie-build 2.5GB / 2.2GB 4bb4abbd29cc4160eef31024512e7ca4
bowtie2_index:2.4.1 Genome index for bowtie2, produced with bowtie2-build 3.3GB / 2.9GB 71d53058ac7ae6a310cfa7880f672144
bwa_index:0.7.17 Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index 4.3GB / 2.7GB 5e8c1ca82087545807280a25edd3bb26
fasta:samtools-1.10 DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) 2.5GB / 715.0MB f89c084aff47de6ca8481102026b7ea0
star_index:2.7.3a Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate 22.9GB / 20.6GB f7d5472c8ade080ff1e432cde0a6d6c3