Aliases: canis_familiaris-ncbi-build31
Digest: 23065fdd9d285f60ec8a674425355d40c0d17dd182b5deb8
Description: The Canis Familiaris (build3.1) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB |
26fc1d1d5f87bde86648ade214afb76d
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 10.5GB / 6.0GB |
6e81dc2cf5bd84105ed5271f91e05794
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.3GB / 2.2GB |
4888df259bbd8c859405c49c46ea1beb
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.1GB / 2.8GB |
8b2f44a08c502cb71ad4403b3e90b7bf
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 3.8GB / 2.5GB |
bbb220c368ef0256b526d9b7d3bc5c10
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.2GB / 670.0MB |
fd94902d546c36eab752baad0bf7a5ab
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 21.4GB / 19.4GB |
cd4f6bdab0bb3affef53606414344edc
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