Aliases: homo_sapiens-ucsc-hg38
Digest: 2c7b4118332e4dd51a9a5ee3ec8c41dc13bdd234bf2a3882
Description: The Homo Sapiens (hg38) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 16.4KB / 2.3KB |
dac419f9eceeabcfd1585bf1e77571d0
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 13.6GB / 7.5GB |
d2ee9a7dd771d2196a3c04c4a376585c
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.9GB / 2.7GB |
41a1f8cbde7b245d51b5edd793ff2292
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.9GB / 3.5GB |
f33daacc67032b0f168b281a60434a9d
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 5.1GB / 3.2GB |
12784bcbfd59bf359ef15d98c0dd2f3c
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.9GB / 905.7MB |
6fc4e01aa009ce7ea8fac3cc8715d47e
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 455.3KB / 110.9KB |
fb8dde6a7e30232fe8b1bfd0dcc4105d
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 26.9GB / 24.3GB |
9b22b9c4d2346b9e7358671b233db97d
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