Aliases: caenorhabditis_elegans-ncbi-ws190
Digest: 4330e61cdb84e95940484bc1153739e1c83d0abdd5a86710
Description: The Caenorhabditis Elegans (WS190) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 589.2KB / 2.3KB |
67f98ec4be8c77e3ec2a6b0d837dd1e0
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 481.5MB / 262.4MB |
884529cf26c904c5a09777ae7ad407a6
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 110.5MB / 98.7MB |
9685f69a0a69ceadf7ec168ae7a0278d
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 143.5MB / 126.0MB |
e7f690817351e9836b800ddb81f85937
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 167.3MB / 108.4MB |
2c355dda652e4f38dc72d22898814314
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 97.0MB / 28.7MB |
fd7eb1967647d8c0fbf7139314d78f99
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 81.5KB / 17.6KB |
53a5ff2d8869184d46506c0596d1a588
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.3GB / 1.5GB |
ecdb46bb1241083b1e525487f614425f
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