Aliases: sus_scrofa-ensembl-sscrofa102
Digest: 4dffabfea72b853ee1b1b1b488589acf447b48df309803de
Description: The Sus Scrofa (Sscrofa10.2) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 16.5KB / 2.3KB |
717dd17bcc6f56c9755a4eb308488191
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 11.1GB / 6.0GB |
5f194a997ced102470444fd3c16ba3f4
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.3GB / 2.1GB |
1e927a31079b527b7bc0b06b1ba483e8
|
|
| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.1GB / 2.8GB |
6b17201c7f9173b5fffbc328b0b9ac9b
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 4.2GB / 2.7GB |
25b1058306ad2b93cb4e6f1d1dfe3423
|
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.5GB / 680.8MB |
e872f38d19871341848922213e1d7db0
|
|
| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 21.7GB / 19.4GB |
22ff3cc2b085b358cea2bde4c588daa0
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