Aliases: caenorhabditis_elegans-ensembl-wbcel235
Digest: 5c776b8e2735a44be55b71df6931a55fce3ee0421383af97
Description: The Caenorhabditis Elegans (WBcel235) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 588.9KB / 2.3KB |
b47617ac69492d5733b413218461a956
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 482.6MB / 262.9MB |
863b92d1be85617c42b9546096f2d8eb
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 111.6MB / 98.8MB |
2d30294254c0cb0dbb3dd14f94e7b454
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 144.6MB / 126.0MB |
a7cb6176790a1024c90b134fc48b9a11
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 168.5MB / 108.4MB |
4ab7e166f9a51f0d582c3c565df6f3a6
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 98.4MB / 28.9MB |
7846de6f8a0a65b8977904200da87bde
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 1.2MB / 17.6KB |
fa052f16c6f48bba0db29d101fc35f32
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.3GB / 1.5GB |
5b6e06560659f1b65d5ea932dfbc1a52
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