Aliases: pan_troglodytes-ncbi-build21
Digest: 67c81755927d2376442cfd96bc744ac00c2203af118c557e
Description: The Pan Troglodytes (build2.1) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 70.3KB / 2.3KB |
7c921fb9328a27054e24d75e30089021
|
|
| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 13.3GB / 7.1GB |
9e22654a441c4017800bb2ecfeeb192f
|
|
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.8GB / 2.5GB |
bb59a0a431483b9db0dc82ddc0ac7457
|
|
| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.6GB / 3.3GB |
3a9d095e56e1c6cde297ce22da6098d2
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 5.2GB / 3.2GB |
1c7840514ae2a1d4b9af36ec82ea89ba
|
|
| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 3.0GB / 793.5MB |
f1db9462e27f1765ccdab66838d8f8ca
|
|
| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 25.6GB / 22.8GB |
08d1442a5006dada485c5f85d806b1b9
|