Aliases: arabidopsis_thaliana-ncbi-tair10
Digest: 6f04a6687f840d5851532fa0713c97013aaf2e81dd2cfaf8
Description: The Arabidopsis Thaliana (TAIR10) reference sequence from NCBI
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asset name:tag
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asset description
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asset/archive size
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archive digest
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| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB | 45abe0b6da81fa063aa8ef1ed81bac88 | |
| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 569.1MB / 313.9MB | 1b18b9a918467c84a7294736ae87543d | |
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 130.7MB / 118.2MB | 34d030c7e5059247764a4acd377837bf | |
| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 169.3MB / 150.6MB | f553042556cb0b36a98c5777411456a8 | |
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 200.0MB / 130.3MB | 3efc849b109c96afd901fcf9fcab4553 | |
| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 115.3MB / 34.4MB | 3ae7a5c420ceabb95c98f142e48b9107 | |
| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 1.2MB / 28.1KB | 691195db245857b3fde0a1509fc7b4ac | |
| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.5GB / 1.6GB | a600dc16afc6560b957b54227af0e571 | |