Aliases: arabidopsis_thaliana-ncbi-tair10
Digest: 6f04a6687f840d5851532fa0713c97013aaf2e81dd2cfaf8
Description: The Arabidopsis Thaliana (TAIR10) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB |
45abe0b6da81fa063aa8ef1ed81bac88
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 569.1MB / 313.9MB |
1b18b9a918467c84a7294736ae87543d
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 130.7MB / 118.2MB |
34d030c7e5059247764a4acd377837bf
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 169.3MB / 150.6MB |
f553042556cb0b36a98c5777411456a8
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 200.0MB / 130.3MB |
3efc849b109c96afd901fcf9fcab4553
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 115.3MB / 34.4MB |
3ae7a5c420ceabb95c98f142e48b9107
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 1.2MB / 28.1KB |
691195db245857b3fde0a1509fc7b4ac
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.5GB / 1.6GB |
a600dc16afc6560b957b54227af0e571
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