Aliases: arabidopsis_thaliana-ensembl-tair10
Digest: 7b533ea27212a7550fef4232356595bcb2014aca9a254831
Description: The Arabidopsis Thaliana (TAIR10) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 69.1KB / 2.3KB |
c269121daa44f36613e28931e48f3622
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 571.0MB / 315.9MB |
100ca7f95591a1dd3a74ad772692f7e2
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 131.3MB / 118.7MB |
ddb571ce0d14f573c481346b621850fd
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 170.6MB / 151.3MB |
e2f60f522fa85c61137b87b288f0d006
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 200.8MB / 130.9MB |
30c0bec1ccc8dbfa65eb003f4d004e62
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 116.6MB / 34.8MB |
b09fccda47cf235c7a3bb9d37b40f927
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.5GB / 1.6GB |
53046fcfa97086e1559bc7908e947291
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