Aliases: pan_troglodytes-ensembl-chimp214
Digest: 8d92cd6c27c638d10eb921e2e3af89da8d2a75b6cb3d9cfd
Description: The Pan Troglodytes (CHIMP2.1.4) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 56.8KB / 2.3KB |
9733c460b9425b2e9c8fc5aa827ec26f
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 13.3GB / 7.1GB |
dda42461820c5d3475be1a4d172dc97e
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.8GB / 2.5GB |
c97702eb7d8118ee720fa62a58fe08ec
|
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.6GB / 3.3GB |
3ad1cdb91c1f8168132e8e5f0c8a855b
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 5.1GB / 3.2GB |
a59c4066aa7ceb2019a4315800ad1d1f
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 3.0GB / 800.7MB |
191230886f8a0bb8e17f77ae7661b1e9
|
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 25.6GB / 22.9GB |
2b4d1c4ee126f57c3c0bb8525550ac14
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