Aliases: drosophila_melanogaster-ucsc-dm3
Digest: 90ce1acb283366d2eeeb8400514eb8959f5c25fb435ffba4
Description: The Drosophila Melanogaster (dm3) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 16.6KB / 2.3KB |
894612aaed62729892744c5fa8054aed
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 615.4MB / 342.1MB |
ab66454ca03bad37fce15725aa94ed4a
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 139.3MB / 128.6MB |
810c26e4646189a4d79a813b2d6c5844
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 182.1MB / 163.7MB |
3812081fe94a5315c49346cf39b454ec
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 216.4MB / 142.9MB |
0d2be6f07b4a09f88c5ed0bc028a9e18
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 126.2MB / 39.2MB |
0b4b3953c317f9409645833ac572148a
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 87.9KB / 19.2KB |
23e1eed2ac7d661042ef5dac4b1605d2
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.6GB / 1.8GB |
d2557fc782c1020e8a3dfa05accbc82b
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