Aliases: gallus_gallus-ensembl-washuc2
Digest: 9e1b1c7b7aa0800609b447b26eecd2fb96eea0534514814d
Description: The Gallus Gallus (WASHUC2) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 16.6KB / 2.3KB |
c03e2f2a9581f57f3a9d395d60ec12de
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 4.6GB / 2.6GB |
72e13320f1fad38b16454a0ae6926f1c
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 1016.2MB / 967.1MB |
5fdb0923493916200e6f0474ade2a1eb
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 1.3GB / 1.2GB |
56dcbea14e9ab4f81f006bac9b9ecda0
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 1.7GB / 1.1GB |
e0edc058624cad199c55b2b546cbc352
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 1000.5MB / 287.4MB |
8c48ac05d91dde8b67a280fe9ac0551a
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 191.2KB / 46.3KB |
d8cd314b178cbda2983d54543fb9e175
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 10.0GB / 8.7GB |
a784b197c9dba5ec480e84495b98b589
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