Aliases: bos_taurus-ucsc-bostau4
Digest: a00dcb54ebd178ec14ebbe8a776bac6a0df609b76895679d
Description: The Bos Taurus (bosTau4) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 58.5KB / 2.3KB |
993a2312b562f6e5a2aab0e95e7e9a64
|
|
| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 11.5GB / 6.3GB |
788fc9c3308f9231992fd3f8128e0f5f
|
|
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.5GB / 2.2GB |
bf9fdb7d666ca7c9a46952d468e10247
|
|
| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.3GB / 2.9GB |
f9f6798331ba091108792cbde24f8bc9
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 4.3GB / 2.7GB |
562158821cefa0110a55629a0e7e17ac
|
|
| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.5GB / 775.6MB |
88bfb65a0802b0140876d432d5b47c42
|
|
| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 169.8KB / 42.9KB |
498167a8cf03eb7fb123feb3ca121d88
|
|
| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 22.9GB / 20.6GB |
932c806e82f61d283bfbbac61e76b36a
|