Aliases: schizosaccharomyces_pombe-ensembl-ef1

Digest: a0c819af21463db4408b067a8c3984e0188e206778ba79cc

Description: The Schizosaccharomyces Pombe (EF1) reference sequence from Ensembl


Assets

download asset name:tag asset description asset/archive size archive digest
abundant_sequences:default Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences 16.8KB / 2.3KB 5ae2b150e294af768329ce0572f48594
bismark_bt2_index:0.22.1 Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 75.0MB / 33.0MB 02860bc48203d51d5aca940310a464e7
bowtie1_index:1.3.0 Genome index for bowtie, produced with bowtie-build 22.0MB / 14.8MB 82f9cad0383c8ba3a86b5f937336fc94
bowtie2_index:2.4.1 Genome index for bowtie2, produced with bowtie2-build 26.1MB / 18.0MB 2cbc391221455191d3a70a1915a87fc5
bwa_index:0.7.17 Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index 21.6MB / 13.6MB 278c52752e084709e01113d9ac31f1cb
fasta:samtools-1.10 DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) 13.3MB / 3.7MB ae3dd1204b5ad24512502b3ff1003eba
star_index:2.7.3a Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate 1.6GB / 489.1MB 4e5154c19e091a31ff346c358a6bebe0