Aliases: rattus_norvegicus-ensembl-rnor_50
Digest: b44336bb5b5e0c01b7b578af2e67c761165e8054213c37a8
Description: The Rattus Norvegicus (Rnor_5.0) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 16.7KB / 2.3KB |
dd8bcf3e09d93d47652570bf08364d14
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 12.3GB / 6.7GB |
878c88cf2ee676f95284cc0812db9000
|
|
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.6GB / 2.4GB |
4ec955411e6e61dd3e4e4c2a0c20a2e8
|
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.4GB / 3.1GB |
25563871ecaa325d6c34221e0f9a1942
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 4.7GB / 3.0GB |
ec44e8129733fc7ef5406e21a9f0f30f
|
|
| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.7GB / 749.5MB |
66c63923d0cc32c4786e254c2c138dd1
|
|
| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 23.9GB / 21.4GB |
743c6bdb4df8bb7b56dc7a216e391098
|