Aliases: drosophila_melanogaster-ucsc-dm6
Digest: b80bcbb5ef9cd38eae8b60bdb42ee5e8ada0dca51c7dd80c
Description: The Drosophila Melanogaster (dm6) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB |
c9a6eb4dbc037eb42d16177dc6ed6624
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 655.2MB / 362.5MB |
bcc0933f6c7d95df4a3352bb48a2227a
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 148.7MB / 135.5MB |
fea4a5f835a2f269749b3ec8c9e6ecfa
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 194.3MB / 172.9MB |
d22906e288b896ed986054dea1f97e44
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 230.7MB / 150.1MB |
90661bd18f573a7ac12abaa8d33d8b59
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 134.9MB / 41.6MB |
029c5ecc2e638dff4f91247c3adfc6c4
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 1.2MB / 19.2KB |
4f89db04c330a4a7855f2474cf49f379
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.6GB / 1.8GB |
5ede4b5a8515aee22a78f632b719caea
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