Aliases: zea_mays-ensembl-agpv2
Digest: c1c56f7bb7ac62a4fbf661b996fb565ddf2e38d7b170a7e3
Description: The Zea Mays (AGPv2) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB |
d5090ddf1f92710fb69ebb51a4cd9209
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 9.3GB / 4.7GB |
c437ead358bb5b7a42633b04aaab6e1b
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.1GB / 1.6GB |
efe8c2fc5c8722dc7bfddb9848e74948
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 2.7GB / 2.1GB |
9df25710f49ab127ee72077be39648e4
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 3.4GB / 1.8GB |
bf052895dd65b83c131824ac426fad84
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.0GB / 590.6MB |
1fa57dc5950a0903a9cf31be981386f9
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 60.6KB / 12.3KB |
279c770d9859e140f019e9b15b239a31
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 19.1GB / 17.2GB |
575ede5d4c3d62ba4c5da740b9251338
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