Aliases: sus_scrofa-ncbi-sscrofa102
Digest: cce6f87458c1ba39e952aad2c91a6a68daf7500a7cef72d2
Description: The Sus Scrofa (Sscrofa10.2) reference sequence from NCBI
Assets
download | asset name:tag | asset description | asset/archive size | archive digest |
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abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB |
f1dae5fbc45dd60767bbe97be58c4fe7
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bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 11.1GB / 6.0GB |
503e2fd970524c47e327029a25f87baf
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bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.3GB / 2.1GB |
e2f65ea2b0cac3d439950a9f63155496
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bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.1GB / 2.8GB |
16487db6768f46740e83f7b5df529c5f
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bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 4.2GB / 2.7GB |
108d17e7e162d6c4bde98c8d0d5846c6
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fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.5GB / 675.3MB |
05cf8dbee033bda7f136a16fa70df3d6
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star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 21.7GB / 19.4GB |
8ecd452256a8e12fd82795ed461feaa1
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