Aliases: pan_troglodytes-ncbi-build31
Digest: d1324aa32a103c93574cd81be0c1579fe3a2a0f4fee9b51b
Description: The Pan Troglodytes (build3.1) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 16.6KB / 2.3KB |
7fd040aca74f4fecde27481c841365d6
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 13.3GB / 7.1GB |
2bda19c802cf3033f8d6128baaf4b503
|
|
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.8GB / 2.5GB |
93dc04aef41a10f59335f6629acc8846
|
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.6GB / 3.3GB |
bf22622dfb2b22fbefde2c3ac35190ff
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 5.2GB / 3.2GB |
f219fcfb5cd0e8d13c87e097fd5eb482
|
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 3.0GB / 795.4MB |
08cc92be53e42093b95b6b5b1277789d
|
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 25.6GB / 22.9GB |
b764979bd6b5a83db14046dc9fc1ce0f
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