Aliases: bos_taurus-ucsc-bostau8
Digest: d532690ea6ebd4a8f8e0fe183f3cad90366dc39a420ee196
Description: The Bos Taurus (bosTau8) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB |
0e499dc432e3d89fb92d6817e6266791
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 12.0GB / 6.7GB |
c3c4278db14cf68d8729120bfc593428
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.6GB / 2.4GB |
52e918a9c15557baaf7f59d2ba5594ca
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.5GB / 3.1GB |
eed3b4f94421d34df74c8fd91b2fcd15
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 4.3GB / 2.8GB |
92c311d1469d6e8a9c10344d0b008915
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.5GB / 826.1MB |
3dba905f0965bec44f474928514ab0cd
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 1.3MB / 42.9KB |
f5a831e5807ffedb09cfb2eb83467ea2
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 24.2GB / 21.9GB |
e22612bbe3be523100872765213c54c0
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