Aliases: gallus_gallus-ncbi-build31
Digest: e0b9518822024257ba12dd178946bc2a2a809dd0887c2837
Description: The Gallus Gallus (build3.1) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 16.5KB / 2.3KB |
66c91db83b8687335debfa1a663fefae
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 4.5GB / 2.6GB |
e2c873727f00d80de3b15bfa3ba32d33
|
|
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 1022.4MB / 973.1MB |
a171c756264677b076900eb145b03fde
|
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 1.3GB / 1.2GB |
5cf22466787c0c48f56e739c354d38f3
|
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 1.6GB / 1.1GB |
cbc91b61ede76e8fd15ec30966377fd9
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 970.3MB / 289.4MB |
8517f327ba428e126bd81a04fa795615
|
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 10.0GB / 8.8GB |
0b32b6c10e97b8e9776bb0a96e5d1f4a
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