Aliases: homo_sapiens-ucsc-hg19
Digest: e6a4bd3bd845eb25984f2c5db1be09b76500be256c1e29e3
Description: The Homo Sapiens (hg19) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 61.9KB / 2.3KB |
3dac8362df41debd53ba330fa35f23af
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 13.4GB / 7.4GB |
f560a1480f5b21047a05a457ce2ae755
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.9GB / 2.6GB |
4c066f7a52cbb9f10de9aa00a3413d2f
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.8GB / 3.4GB |
71e130b63db6bca6e519316a30b6b05b
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 5.0GB / 3.2GB |
050d05914ae4fed50f9837b0540d26fd
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.9GB / 894.1MB |
956eb50e01114853e63aa4d1cf14af74
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|
| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 455.2KB / 110.6KB |
cbae9d35738f3e6fcd2633eb0c1bedf9
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 26.3GB / 23.7GB |
cae4a5e6be97b020af9eef6980be150f
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