Aliases: rattus_norvegicus-ncbi-rnor_60
Digest: e740da98fc6e6bec46fd8d10f9cec2823f049543c5b6ba82
Description: The Rattus Norvegicus (Rnor_6.0) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 16.6KB / 2.3KB |
829e8c9ba6c68822a97aef9827af9274
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 12.3GB / 6.9GB |
d8ae79662dc8a56e047fbb723ee1ef16
|
|
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.7GB / 2.5GB |
11cf90f7e9ee9aa5e6bc4931553dc31a
|
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 3.5GB / 3.2GB |
913a25b2d1c2b0fb86111f6aa388cf1a
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 4.5GB / 2.9GB |
ff5bf457016ee8bb36b32e89fec3b1ae
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.6GB / 764.9MB |
4f5d1c49f0e8c698d07394212dba6d90
|
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 24.4GB / 22.0GB |
879d8d93167d38ff4e1db2149e19e2a1
|