Aliases: danio_rerio-ensembl-zv9
Digest: f01d11bd41587682fdaf207aaf09a90769de53040ed7474b
Description: The Danio Rerio (Zv9) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 588.5KB / 2.3KB |
871e9298cb942d0540f6969f9dd8f20a
|
|
| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 6.2GB / 6.9GB |
65e46c1fc0d8317f0604625d25c13b6b
|
|
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 1.4GB / 1.2GB |
f573bbd480a72edf7313c41dd83e65f5
|
|
| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 1.8GB / 1.6GB |
363d004a05a8d334f2074e80a40e8e9c
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 2.2GB / 1.4GB |
0d480289531ed8790463fb272ef7e9b2
|
|
| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 1.3GB / 387.5MB |
42fc87a992679f441b3a35c66a8ea1ef
|
|
| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 83.9KB / 18.2KB |
249eaa81ae214dd3ca7e85f29928b8e8
|
|
| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 13.1GB / 11.7GB |
a73a638b31b32f0a22ae87ebb6fb2e15
|