Aliases: caenorhabditis_elegans-ucsc-ce10
Digest: f4e14438d28bb1d0dc61343de4063de9848109ba9927ab34
Description: The Caenorhabditis Elegans (ce10) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 588.5KB / 2.3KB |
06862bd7d98c3e9408a026ba60d10b28
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 483.2MB / 263.6MB |
d4c9f7c7a68f0d481fbe7ba4c4fcf9e7
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 111.6MB / 98.8MB |
7c89dc31f114e99522b10ddb2abbd63a
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 144.6MB / 126.0MB |
4ae613929d4a818c20cb6403cc42c9ef
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 168.5MB / 108.4MB |
2dbe5432f76a7348a87a170cfb877ebf
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 98.7MB / 30.4MB |
5fcd3d409b68bafa9b9c6e23a6b9c4e0
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 1.2MB / 17.6KB |
7c3edb24edf660274abe31d04189a1a1
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.3GB / 1.5GB |
51c70e204c7dc69a505884abc8e48e4b
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