Aliases: caenorhabditis_elegans-ucsc-ce6
Digest: fc1d5d064722bd2b324be0c76ccccdcce39b6416860cf42e
Description: The Caenorhabditis Elegans (ce6) reference sequence from UCSC
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB |
88ed4b64c9c787177531282e8df14437
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 483.2MB / 263.5MB |
3faa3c90f87614e0d5a08fe555547db1
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 111.6MB / 98.8MB |
7fbdfa4c04072b21d9980d137328c4b8
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 144.6MB / 126.0MB |
c02013e2ca475b1b40fff8d82c4b80f1
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 168.5MB / 108.4MB |
143cf8762940ecb8e49abc7b455a7ad0
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 98.7MB / 30.4MB |
c31559ccec0ed2280f90c2922aae3a75
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 1.2MB / 17.6KB |
5427bd45a431ac1b336243e3b3b73cee
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 2.3GB / 1.5GB |
0e7b0d8bfedfb5662b9e429ad2867dc0
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