Aliases: zea_mays-ensembl-agpv3
Digest: ff630c354340cf72b8a48a7704e8ae9f87868122d8df0ac8
Description: The Zea Mays (AGPv3) reference sequence from Ensembl
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 46.2KB / 2.3KB |
3cc63325f1d413d088550cdb9cbe6eba
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 9.3GB / 3.3GB |
5d7acd3218ebab39d74d284dcd94692c
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 2.1GB / 1.6GB |
b9b08b1327dc881099cbdd12afbea8f6
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 2.7GB / 2.1GB |
12ea6a5a3ec2dd1254a18f6975a8171b
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 3.4GB / 1.8GB |
9edf6e46e171fa3ee4d0173bfa152b91
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 2.0GB / 590.9MB |
9a74861e25ef04a37d4b18c2983e2572
|
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| small_rna:default | Small RNA sequences in the FASTA format. A predicted hairpin portion of a miRNA transcript and information on the location and sequence of the mature miRNA sequence | 60.6KB / 12.2KB |
ebdef646f9780fd7f66d0f8e68316b45
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 19.1GB / 17.2GB |
a566b4fc32c1d02db5bfe908bd29dc7e
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