Aliases: gallus_gallus-ncbi-build21
Digest: ff95f3ae9f8df6afd7a0f0323ba8fd918f451ca1ca5ca0c1
Description: The Gallus Gallus (build2.1) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 589.4KB / 2.3KB |
1d9fc540c44e515da3c0518bb2cc7817
|
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 4.6GB / 2.6GB |
a164b4a4533b449887e751f23e833169
|
|
| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 1016.2MB / 967.0MB |
2ab2a7c8847fecc1354f63e6b978cf51
|
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 1.3GB / 1.2GB |
732574d3d09c7513e05ec8bbe062e8f2
|
|
| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 1.7GB / 1.1GB |
236e2759834d09025d18fc7b6813e3ce
|
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 998.2MB / 285.1MB |
481b3bcb0e02bad452e9bff8cb9d0ecb
|
|
| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 10.0GB / 8.7GB |
d5ee3e11501e8a8adbb2f97d97f4d1c6
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