Asset class: fasta
Description: DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict)

Attributes

Refgenie CLI pull command

refgenie pull escherichia_coli_k_12_mg1655-ncbi-2001-10-15/fasta:samtools-1.10

API endpoints

Asset directory contents

  • http | s3: 2828cd20a59fecfeaa34f4baa97150c4e05b133c1a8eff2a.chrom.sizes
  • http | s3: 2828cd20a59fecfeaa34f4baa97150c4e05b133c1a8eff2a.dict
  • http | s3: 2828cd20a59fecfeaa34f4baa97150c4e05b133c1a8eff2a.fa
  • http | s3: 2828cd20a59fecfeaa34f4baa97150c4e05b133c1a8eff2a.fa.fai