Aliases: escherichia_coli_k_12_mg1655-ncbi-2001-10-15
Digest: 2828cd20a59fecfeaa34f4baa97150c4e05b133c1a8eff2a
Description: The Escherichia Coli K 12 Mg1655 (2001-10-15) reference sequence from NCBI
Assets
| download | asset name:tag | asset description | asset/archive size | archive digest |
|---|---|---|---|---|
| abundant_sequences:default | Abundant sequences in the FASTA format -- PhiX spike-in, Poly(A), Poly(C) and adapter sequences | 1.1MB / 2.3KB |
d886aefe3f363598c963ab05e4f43292
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| bismark_bt2_index:0.22.1 | Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 | 38.6MB / 12.4MB |
43eaeb974e75c6d3928dc5f2ab4a5fa7
|
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| bowtie1_index:1.3.0 | Genome index for bowtie, produced with bowtie-build | 13.9MB / 7.0MB |
bdcee142817d7e9134909218192e9cd2
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| bowtie2_index:2.4.1 | Genome index for bowtie2, produced with bowtie2-build | 15.4MB / 8.2MB |
d44a117f3b3a6008d1c23c11d91df48d
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| bwa_index:0.7.17 | Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index | 8.9MB / 5.0MB |
282865fba94904378c398a153a42142a
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| fasta:samtools-1.10 | DNA sequences in the FASTA format, indexed FASTA (produced with samtools index), chromosome sizes file and FASTA dict (produced with samtools dict) | 5.6MB / 1.4MB |
7b8552ece46c2f2e85bc921f89852428
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| star_index:2.7.3a | Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate | 1.5GB / 287.6MB |
bf35135c6be770e1c0804b43d5f30fe1
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