Attributes

• asset_path: fasta
• seek_keys:
• http | s3 fasta: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385.fa
• http | s3 fai: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385.fa.fai
• http | s3 chrom_sizes: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385.chrom.sizes
• http | s3 dict: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385.dict
• http | s3 dir: .
• archive_digest: 44e29f926b81f173891e08e0dcc03448
• archive_size: 841.8KB
• asset_size: 2.7MB
• asset_parents: None
• asset_children:
  • staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/bismark_bt2_index:0.22.1
  • staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/bowtie1_index:1.3.0
  • staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/bowtie2_index:2.4.1
  • staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/bwa_index:0.7.17
  • staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/star_index:2.7.3a
• asset_digest: 7f114d8f97c7bd71712b0e2e6cc8f866
• legacy_archive_digest: 2614739bfb443f90d4fa0ce69768b0d5

Refgenie CLI pull command

refgenie pull staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/fasta:samtools-1.10

API endpoints

• archive
• asset digest
• archive digest
• build recipe
• build log
• build inputs
• asset directory contents
• attributes

Asset directory contents

• http | s3: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385.chrom.sizes
• http | s3: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385.dict
• http | s3: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385.fa
• http | s3: 5fdf67c6f9095e71e2b274d0278f7145df7e94a5d1ddf385.fa.fai