Attributes

• asset_path: star_index
• seek_keys:
• http | s3 star_index: .
• http | s3 dir: .
• archive_digest: 395003aa93e61aa48f00e5671b05ca9c
• archive_size: 184.5MB
• asset_size: 1.5GB
• asset_parents:
  • staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/fasta:samtools-1.10
• asset_children: None
• asset_digest: 43851f55adb82f902c0ee360d21ec2b7
• legacy_archive_digest: 4a02e60071e28cce6350473d30c9f4dd

Refgenie CLI pull command

refgenie pull staphylococcus_aureus_nctc_8325-ncbi-2006-02-13/star_index:2.7.3a

API endpoints

• archive
• asset digest
• archive digest
• build recipe
• build log
• build inputs
• asset directory contents
• attributes

Asset directory contents

• http | s3: chrLength.txt
• http | s3: chrName.txt
• http | s3: chrNameLength.txt
• http | s3: chrStart.txt
• http | s3: Genome
• http | s3: genomeParameters.txt
• http | s3: SA
• http | s3: SAindex